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Volume 8; Issue 7 Suppleme
Main
BMC Bioinformatics
Volume 8; Issue 7 Suppleme
BMC Bioinformatics
Volume 8; Issue 7 Suppleme
1
Proceedings of the Fourth Annual Conference of the MidSouth Computational Biology and Bioinformatics Society
Dawn Wilkins
,
Yuriy Gusev
,
Raja Loganantharaj
,
Susan Bridges
,
Stephen Winters-Hilt
,
Jonathan D Wren
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 230 KB
Vos balises:
english, 2007
2
Preliminary nanopore cheminformatics analysis of aptamer-target binding strength
Karen Thomson
,
Iftekhar Amin
,
Eric Morales
,
Stephen Winters-Hilt
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 1.60 MB
Vos balises:
english, 2007
3
Analysis of nanopore detector measurements using Machine-Learning methods, with application to single-molecule kinetic analysis
Matthew Landry
,
Stephen Winters-Hilt
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 749 KB
Vos balises:
english, 2007
4
Comparison of probabilistic Boolean network and dynamic Bayesian network approaches for inferring gene regulatory networks
Peng Li
,
Chaoyang Zhang
,
Edward J Perkins
,
Ping Gong
,
Youping Deng
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 376 KB
Vos balises:
english, 2007
5
Duration learning for analysis of nanopore ionic current blockades
Alexander Churbanov
,
Carl Baribault
,
Stephen Winters-Hilt
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 733 KB
Vos balises:
english, 2007
6
Analysis of circadian pattern reveals tissue-specific alternative transcription in leptin signaling pathway
Andrey A Ptitsyn
,
Jeffrey M Gimble
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 790 KB
Vos balises:
english, 2007
7
Computational analysis of biological functions and pathways collectively targeted by co-expressed microRNAs in cancer
Yuriy Gusev
,
Thomas D Schmittgen
,
Megan Lerner
,
Russell Postier
,
Daniel Brackett
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 4.08 MB
Vos balises:
english, 2007
8
Automatic delineation of malignancy in histopathological head and neck slides
Mutlu Mete
,
Xiaowei Xu
,
Chun-Yang Fan
,
Gal Shafirstein
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 1.59 MB
Vos balises:
english, 2007
9
SVM clustering
Stephen Winters-Hilt
,
Sam Merat
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 469 KB
Vos balises:
english, 2007
10
A novel, fast, HMM-with-Duration implementation – for application with a new, pattern recognition informed, nanopore detector
Stephen Winters-Hilt
,
Carl Baribault
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 1.06 MB
Vos balises:
english, 2007
11
Systems biology approach for mapping the response of human urothelial cells to infection byEnterococcus faecalis
Mikhail G Dozmorov
,
Kimberly D Kyker
,
Ricardo Saban
,
Nathan Shankar
,
Arto S Baghdayan
,
Michael B Centola
,
Robert E Hurst
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 1.37 MB
Vos balises:
english, 2007
12
Nanopore-based kinetics analysis of individual antibody-channel and antibody-antigen interactions
Stephen Winters-Hilt
,
Eric Morales
,
Iftekhar Amin
,
Alexander Stoyanov
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 1.53 MB
Vos balises:
english, 2007
13
A survey of DNA motif finding algorithms
Modan K Das
,
Ho-Kwok Dai
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 364 KB
Vos balises:
english, 2007
14
Comparison of gene expression profiles altered by comfrey and riddelliine in rat liver
Lei Guo
,
Nan Mei
,
Stacey Dial
,
James Fuscoe
,
Tao Chen
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 681 KB
Vos balises:
english, 2007
15
Prediction of peptides observable by mass spectrometry applied at the experimental set level
William S Sanders
,
Susan M Bridges
,
Fiona M McCarthy
,
Bindu Nanduri
,
Shane C Burgess
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 270 KB
Vos balises:
english, 2007
16
ProtQuant: a tool for the label-free quantification of MudPIT proteomics data
Susan M Bridges
,
GBryce Magee
,
Nan Wang
,
WPaul Williams
,
Shane C Burgess
,
Bindu Nanduri
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 498 KB
Vos balises:
english, 2007
17
Towards validating the hypothesis of phylogenetic profiling
Raja Loganantharaj
,
Mazen Atwi
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 950 KB
Vos balises:
english, 2007
18
Metabonomics evaluations of age-related changes in the urinary compositions of male Sprague Dawley rats and effects of data normalization methods on statistical and quantitative analysis
Laura K Schnackenberg
,
Jinchun Sun
,
Parvaneh Espandiari
,
Ricky D Holland
,
Joseph Hanig
,
Richard D Beger
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 586 KB
Vos balises:
english, 2007
19
Gene expression changes induced by the tumorigenic pyrrolizidine alkaloid riddelliine in liver of Big Blue rats
Nan Mei
,
Lei Guo
,
Ruqing Liu
,
James C Fuscoe
,
Tao Chen
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 448 KB
Vos balises:
english, 2007
20
Structure and function predictions of the Msa protein inStaphylococcus aureus
Vijayaraj Nagarajan
,
Mohamed O Elasri
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 519 KB
Vos balises:
english, 2007
21
Statistical tools for transgene copy number estimation based on real-time PCR
Joshua S Yuan
,
Jason Burris
,
Nathan R Stewart
,
Ayalew Mentewab
,
C Neal Stewart
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 423 KB
Vos balises:
english, 2007
22
Cloning, analysis and functional annotation of expressed sequence tags from the EarthwormEisenia fetida
Mehdi Pirooznia
,
Ping Gong
,
Xin Guan
,
Laura S Inouye
,
Kuan Yang
,
Edward J Perkins
,
Youping Deng
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 1.06 MB
Vos balises:
english, 2007
23
Robust clustering in high dimensional data using statistical depths
Yuanyuan Ding
,
Xin Dang
,
Hanxiang Peng
,
Dawn Wilkins
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 417 KB
Vos balises:
english, 2007
24
The α-Hemolysin nanopore transduction detector – single-molecule binding studies and immunological screening of antibodies and aptamers
Stephen Winters-Hilt
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 2.09 MB
Vos balises:
english, 2007
25
Nanopore current transduction analysis of protein binding to non-terminal and terminal DNA regions: analysis of transcription factor binding, retroviral DNA terminus dynamics, and retroviral integrase-DNA binding
Stephen Winters-Hilt
,
Amanda Davis
,
Iftekhar Amin
,
Eric Morales
Journal:
BMC Bioinformatics
Année:
2007
Langue:
english
Fichier:
PDF, 586 KB
Vos balises:
english, 2007
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